SNP ID | Model | Genotype | Control | Case | OR (95% CI) | p value |
---|---|---|---|---|---|---|
rs34861192 | Codominant | GG | 130 | 146 | 1 | |
AG | 61 | 52 | 0.76(0.49–1.18) | 0.220 | ||
AA | 9 | 1 | 0.10(0.01–0.79) | 0.029* | ||
Dominant | GG | 130 | 146 | 1 | ||
AG-AA | 70 | 53 | 0.67(0.44–1.03) | 0.071 | ||
Recessive | GG-AG | 191 | 198 | 1 | ||
AA | 9 | 1 | 0.11(0.01–0.85) | 0.035* | ||
Log-additive | – | – | – | 0.63(0.43–0.93) | 0.019* | |
rs3219175 | Codominant | GG | 129 | 146 | 1 | |
AG | 62 | 50 | 0.71(0.46–1.11) | 0.133 | ||
AA | 9 | 1 | 0.10(0.01–0.79) | 0.029* | ||
Dominant | GG | 129 | 146 | 1 | ||
AG-AA | 71 | 51 | 0.63(0.41–0.98) | 0.038* | ||
Recessive | GG-AG | 191 | 196 | 1 | ||
AA | 9 | 1 | 0.11(0.01–0.86) | 0.036* | ||
Log-additive | – | – | – | 0.60(0.41–0.88) | 0.010* | |
rs3745368 | Codominant | GG | 137 | 156 | 1 | |
AG | 56 | 41 | 0.64(0.40–1.02) | 0.059 | ||
AA | 6 | 2 | 0.29(0.06–1.45) | 0.131 | ||
Dominant | GG | 137 | 156 | 1 | ||
AG-AA | 62 | 43 | 0.61(0.38–0.95) | 0.030* | ||
Recessive | GG-AG | 193 | 197 | 1 | ||
AA | 6 | 2 | 0.32(0.06–1.63) | 0.170 | ||
Log-additive | – | – | – | 0.61(0.41–0.92) | 0.019* | |
rs1477341 | Codominant | TT | 51 | 68 | 1 | |
AT | 105 | 90 | 0.64(0.41–1.02) | 0.059 | ||
AA | 43 | 32 | 0.56(0.31–1.00) | 0.051 | ||
Dominant | TT | 51 | 68 | 1 | ||
AT-AA | 148 | 122 | 0.62(0.40–0.96) | 0.030* | ||
Recessive | TT-AT | 156 | 158 | 1 | ||
AA | 43 | 32 | 0.74(0.44–1.23) | 0.239 | ||
Log-additive | – | – | – | 0.73(0.55–0.98) | 0.036* |