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Table 1 Gene ontology (GO) analysis for differentially expressed genes (DEGs)

From: Screening for potential genes associated with bone overgrowth after mid-shaft femur fracture in a rat model

GO-ID

Description

Counts

P value

Up-regulated genes

 GO:0009611

Response to wounding

23

3.65E−09

 GO:0006952

Defense response

20

1.82E−07

 GO:0006954

Inflammatory response

15

2.29E−07

 GO:0010033

Response to organic substance

29

2.52E−06

 GO:0000267

Cell fraction

30

6.97E−06

 GO:0042330

Taxis

9

5.29E−06

 GO:0006935

Chemotaxis

9

5.29E−06

Down-regulated genes

 GO:0019935

Cyclic-nucleotide-mediated signaling

11

3.49E−05

 GO:0031410

Cytoplasmic vesicle

27

3.23E−04

 GO:0051046

Regulation of secretion

16

2.58E−04

 GO:0031982

Vesicle

28

3.44E−04

 GO:0019932

Second-messenger-mediated signaling

13

2.80E−04

 GO:0007187

G-protein signaling, coupled to cyclic nucleotide second messenger

9

3.04E−04

 GO:0031988

Membrane-bounded vesicle

25

4.69E−04

 GO:0016023

Cytoplasmic membrane-bounded vesicle

24

6.11E−04

 GO:0044421

Extracellular region part

29

6.64E−04