Skip to main content

Table 5 Top 20 differential expression circRNA list between three groups

From: Circular RNA atlas in osteoclast differentiation with and without alendronate treatment

CircBase_ID

Gene ID

OC-TPM

OC_AL-TPM

OPCS-TPM

Log2 ratio (OPCS/OC)

Up-downregulation (OPCS/OC)

P value

FDR

Log2 ratio (OC_AL/OC)

Up-downregulation (OC_AL/OC)

P value

FDR

hsa_circ_0008883

CAPN15

11.919

439.926

157.293

3.722

Up

0.000222228

0.005249134

5.206

Up

2.46E− 08

1.24E− 06

hsa_circ_0007761

ATXN7

29.796

782.09

629.171

4.4

Up

3.76E− 15

1.14E− 12

4.714

Up

1.26E− 12

1.38E− 10

hsa_circ_0000053

STK40

17.878

439.926

134.822

2.915

Up

0.00232928

0.033387027

4.621

Up

9.62E− 08

3.97E− 06

hsa_circ_0004137

RBM23

17.878

342.164

157.293

3.137

Up

0.000663894

0.014076789

4.258

Up

4.73E− 06

0.000117454

hsa_circ_0042079

GAS7

17.878

342.164

134.822

2.915

Up

0.00232928

0.033125964

4.258

Up

4.73E− 06

0.00011727

hsa_circ_0001030

EXOC6B

101.307

1857.464

292.115

1.528

Up

0.00431496

0.043788952

4.197

Up

7.48E− 25

2.96E− 22

hsa_circ_0051849

SNRNP70

71.511

1173.135

247.174

1.789

Up

0.00302166

0.041494591

4.036

Up

7.88E− 16

1.26E− 13

hsa_circ_0002161

GSPT1

41.715

635.448

179.763

2.107

Up

0.00418748

0.042733703

3.929

Up

3.53E− 09

2.13E− 07

hsa_circ_0071099

ARHGAP10

113.226

1661.942

696.582

2.621

Up

2.52E− 10

3.59E− 08

3.876

Up

8.09E− 21

2.17E− 18

hsa_circ_0008156

ITPA

23.837

342.164

157.293

2.722

Up

0.001623886

0.024749898

3.843

Up

1.28E− 05

0.000297513

hsa_circ_0000566

VRK1

1853.331

97.761

471.878

− 1.974

Down

1.92E− 13

4.63E− 11

− 4.245

Down

3.16E− 13

3.86E− 11

hsa_circ_0000826

ANKRD12

3629.191

244.403

1348.224

− 1.429

Down

8.47E− 17

3.55E− 14

− 3.892

Down

7.83E− 24

2.53E− 21

hsa_circ_0000284

HIPK3

23306.676

1906.345

9122.98

− 1.353

Down

2.00E− 92

1.64E− 88

− 3.612

Down

1.52E− 139

6.05E− 136

hsa_circ_0000994

SLC8A1

7472.915

879.851

4808.665

− 0.636

Down

4.27E− 10

6.03E− 08

− 3.086

Down

2.15E− 40

2.13E− 37

hsa_circ_0003692

FNDC3B

1120.341

195.523

292.115

− 1.939

Down

2.00E− 08

2.06E− 06

− 2.519

Down

6.75E− 06

0.000163499

hsa_circ_0007710

ELF2

1191.852

244.403

224.704

− 2.407

Down

4.54E− 11

7.22E− 09

− 2.286

Down

1.00E− 05

0.000240639

hsa_circ_0002922

ZNF124

2222.805

488.806

943.757

− 1.236

Down

5.61E− 09

6.25E− 07

− 2.185

Down

2.06E− 09

1.28E− 07

hsa_circ_0001346

RNF13

1501.734

342.164

179.763

− 3.062

Down

5.76E− 17

2.48E− 14

− 2.134

Down

1.54E− 06

4.85E− 05

hsa_circ_0000119

MAN1A2

3355.065

782.09

1235.872

− 1.441

Down

8.35E− 16

2.91E− 13

− 2.101

Down

4.14E− 13

4.94E− 11

hsa_circ_0000638

ETFA

744.908

195.523

179.763

− 2.051

Down

2.70E− 06

0.000154121

− 1.93

Down

0.00211178

0.024373077