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Table 3 The top five terms of Gene Ontology category analysis for the down-regulated differentially expressed genes

From: Identification of genes associated with methotrexate resistance in methotrexate-resistant osteosarcoma cell lines

Category

Term

Name

Counts

Gene symbol

p value

Biological process

GO:0000226

Microtubule cytoskeleton organization

46

AURKA, AURKB, CCNB1 CDK1, CENPA, FBXO5, …

0

GO:0000278

Mitotic cell cycle

119

AURKA, AURKB, CCNE2, CDK1, CENPA, CENPH, FBXO5, RRM2, …

0

GO:0000280

Nuclear division

68

AURKA, AURKB, CCNB1, CCNB2, CENPE, …

0

 

GO:0006996

Organelle organization

164

AURKA, AURKB, CCNB1, CCNB2, CDK1, CENPA, CENPE, CENPH, …

0

 

GO:0007017

Microtubule-based process

59

AURKA, AURKB, CCNB1, CDK1, CENPA, FBXO5, …

0

Molecular function

GO:0005515

Protein binding

334

AURKA, AURKB, CCNB1, CCNB2, CCNE2, CDK1, HMGB2, …

8.15E−13

GO:0000166

Nucleotide binding

122

AURKA, AURKB, CDK1, CENPE, EEF1A1, …

1.32E−07

GO:1901265

Nucleoside phosphate binding

122

AURKA, AURKB, CDK1, CENPE, EEF1A1, …

1.35E−07

GO:0036094

Small molecule binding

127

AURKA, AURKB, CDK1, CENPE, EEF1A1, …

2.24E−07

GO:0008017

Microtubule binding

19

CENPE, KIF14, KIF15, PLK1, …

8.25E−07

Cellular components

GO:0000775

Chromosome, centromeric region

37

AURKB, BUB1, CCNB1, CENPA, CENPH, …

0

GO:0000776

Kinetochore

29

CCNB1, CENPA, CENPE CENPH, KIF22, …

0

GO:0000777

Condensed chromosome kinetochore

27

CCNB1, CENPA, CENPE CENPH, KIF2C, …

0

GO:0000779

Condensed chromosome, centromeric region

28

AURKB, CCNB1, CENPA, CENPE, CENPH, …

0

 

GO:0000793

Condensed chromosome

42

AURKB, CCNB1, CENPA, CENPH, KIF2C, …

0