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Table 1 List of PCR primers

From: A preliminary study of osteochondral regeneration using a scaffold-free three-dimensional construct of porcine adipose tissue-derived mesenchymal stem cells

Marker

Gene

Sequence (forward/reverse)

Ann. temp. (°C)

Fragment (bp)

Premature

OCT-4

5′-GTCGCCAGAAGGGCAAAC-3′

57.0

157

5′-CAGGGTGGTGAAGTGAGGG-3′

SOX-2

5′-CCCTGCAGTACAACTCCATGAC-3′

59.0

85

5′-GGTGCCCTGCTGCGAGTA-3′

KLF-4

5′-CGGCAAAACCTACACGAAGAGT-3′

59.0

119

5′-AGTTCATCTGAGCGGGCAAAT-3′

NANOG

5′-CTTATTCAGGACAGCCCTGATTCTTC-3′

59.0

613

5′-AAGACGGCCTCCAAATCACTG-3′

C-MYC

5′-GGATTCCGCCTCGTT-3′

55.1

184

5′-TCTCCAAGCATCACTCG-3′

Osteogenic

ALP

5′-ATGAGCTCAACCGGAACAA-3′

56.0

131

5′-GTGCCCATGGTCAATCCT-3′

OC

5′-TCAACCCCGACTGCGACGAG-3′

68.0

204

5′-TTGGAGCAGCTGGGATGATGG-3′

ON

5′-TCCGGATCTTTCCTTTGCTTTCTA-3′

57.5

187

5′-CCTTCACATCGTGGCAAGAGTTTG-3′

Chondrogenic

SOX-9

5′-CCGGTGCGCGTCAAC-3′

57.5

119

5′-TGCAGGTGCGGGTACTGAT-3′

AGG

5′-TTCCCTGAGGCCGAGAAC-3′

65.5

194

5′-GGGCGGTAATGGAACACAAC-3′

Adipogenic

PPAR-γ2

5′-GCGCCCTGGCAAAGCACT-3′

59.8

238

5′-TCCACGGAGCGAAACTGACAC-3′

AP2

5′-GGCCAAACCCAACCTGA-3′

59.8

167

5′-GGGCGCCTCCATCTAAG-3′

Housekeeping

GAPDH

5′-ACCACAGTCCATGCCATCAC-3′

60.0

450

5′-TCCACCACCCTGTTGCTGTA-3′

  1. OCT-4 octamer-binding transcription factor 4, SOX-2 sex-determining region Y box 2; KLF-4 Krüppel-like factor 4, NANOG, homeobox protein NANOG, C-MYC, cellular myelocytomatosis oncogene, ALP alkaline phosphatase, OC osteocalcin, ON osteonectin, SOX-9 sex-determining region Y-box 9, AGG aggrecan, PPAR-γ2 peroxisome proliferator-activated receptor γ2, AP2 adipocyte fatty acid-binding protein 2, GAPDH glyceraldehyde-3-phosphate dehydrogenase.