Skip to main content

Table 1 Oligonucleotide sequences

From: Effects of initial boost with TGF-beta 1 and grade of intervertebral disc degeneration on 3D culture of human annulus fibrosus cells

Gene name

Accession number

Oligonucleotides (5′ → 3′), (up/down)

Base pairs

Aggrecan

NM_001135

GGC TGC TGT CCC CGT AGA AGA/GGG AGG CCA AGT AGG AAG GAT

163

Biglycan

NM_001711

GCT GCC CCT GCT CTC CCA CCA CA/GAA ATG CAT GAG GAG GAG GAA CAG AAC

217

Collagen type I

NM_000088

CGA TGG CTG CAC GAG TCA CAC/CAG GTT GGG ATG GAG GGA GTT TAC

180

Collagen type II

NM_001844

CCG GGC AGA GGG CAA TAG CAG GTT/CAA TGA TGG GGA GGC GTG AG

128

Collagen type III

NM_000090

GGT TTT GCC CCG TAT TAT GGA/AGT TTC TAG CGG GGT TTT TAC GAG

142

Collagen type X

NM_000493

GAA CTC CCA GCA CGC AGA ATC C/GTG TTG GGT AGT GGG CCT TTT ATG

145

Decorin

NM_001920

ACT TCT GCC CAC CTG GAC ACA ACA C/AAT GGC AGA GCG CAC GTA GAC ACA

128

Glyceraldehyde-3-phospate dehydrogenase

NM_002046

GGC GAT GCT GGC GCT GAG TAC/TGG TCC ACA CCC ATG ACG A

149

Matrix metalloproteinase 2

NM_004530

TCC CTG CCC CTC CCT TCA AC/CCT TTC CAG CAG ACA CCA TCA CC

196

Matrix metalloproteinase 13

NM_002427

CAA AAA CGC CAG ACA AAT GTG ACC/GAT GCA GGC GCC AGA AGA ATC T

105