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Table 1 Oligonucleotides

From: An ovine in vitro model for chondrocyte-based scaffold-assisted cartilage grafts

gene name

reference sequence

oligonucleotides (5‘→3‘) (up/down)

product size (base pairs)

GAPDH

AF02943

TGG AGT CCA CTG GGG TCT TCA CTA/TTG CTG ACA ATC TTG AGG GTA TT

160

aggrecan

AF019758

TCG GGG TAG GTG GCG AGG AA/GGG CGG TTG GGG AGA CTT CAA

150

type ΙΙα1 collagen

AF138883

GCT GGT CAG AGG GGC ATC GTT/AGG GGG ACC TCG GTC TCC AGA T

129

MMP1

AF267156

CAT TCT ACT GAC ATT GGG GCT CTG/GAA TCG TAG TTA TGG CAT CAA AAG T

190

MMP2

NM_001166180

CTT CCA GGG CAC ATC TTA CGA CAG/ACA TGG GGC ACC TTC CGA GTT

160

MMP13

AF267157

TGC ATC CTC AGC AGG TTG AAG C/GTC ATG GGA AGG GTG CTC ATA GG

101

osteocalcin

NM_001040009

AGG GCA GCG AGG TGG TGA AG/GCC GTA GAA GCG CCG ATA GG

173

TIMP1

NM_001009319

ACA GGT CCC AGA ATC GCA GTG AG/CAG CAG CAT AGG TCT TGG TGA ATC C

147

TIMP2

NM_001166186

GGG CCA AAG CGG TCA GTA AGA AG/AGA GGA GGG GGC TGT GTA GAT AAA C

149

TIMP3

NM_001166187

CCA CAC GGA AGC CTC TGA AAG TC/AGG GTA GCC GAA ATT GGA GAG CA

280

  1. GAPDH glyceraldehyde-3-phosphate dehydrogenase.
  2. MMP matrix metalloproteinase.
  3. TIMP tissue inhibitor of metalloproteinases.